Browse of TCMCG005C34997 protein

CDS

Accession Number	TCMCG005C34997
gbkey	CDS
Protein Id	XP_020248176.1
Location	complement(join(69972790..69973169,69974522..69974582,69974666..69974757,69974853..69974907,69975005..69975245,69975369..69975452,69976993..69977134,69977247..69977354,69977670..69977751,69978076..69978147,69978340..69978470,69978552..69978654,69980258..69980666,69981783..69981916,69982016..69982078,69982159..69982314,69982516..69982635,69982931..69983047,69983152..69983298,69983662..69983730,69983809..69983868,69988539..69988730,69990540..69990602,69990762..69990878,69991400..69991680,69992962..69993085,69993209..69993816,69993948..69994059,69994983..69995131,69995211..69995349,69995521..69995700,69997149..69997495,69999549..69999765,69999879..70000051,70001194..70001380))
Gene	LOC109825712
GeneID	109825712
Organism	Asparagus officinalis

Protein

Length	1904aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020392587.1
Definition	nuclear pore complex protein GP210

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Nuclear pore membrane glycoprotein
KEGG_TC	1.l.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K14314        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCGATCGCGCCGTACGCTGGTCGGAAGGAGACGGCGGTTTATGCGAAGGATGGGCGGACCGGGATCACGATCAGGTGTAAGGTTTTCATCGATAGGGTCTCGAGGATCCAGATTTTTCACCACGCGGTGAAGATTGATTTGGACGAGCTCGCGACGCTGCGCATTCGGGCGTTTGATGACGAAGAAAATGTATTCTCATCGTTGGTAGGTGTAAAGTTTCTCTGGAAGCTTGAGCCGAAGTCTTTAGAACCTAATGCTATTCATCATCTCGTCCATGTTCCACTGAAGGAAACACCACTGAGTGATTGTGGCGGTTTTTGTGGCGATTTAGATACTCAGATAGACCTGGAAGATAGAGGCTTTGGTGCAGATTTATATGTTGTAAGGGGAACTAAAATTGGTCATGAGGTTGTGACTGCCCAGTTGGTTGAGCCACAACTTGAGCACGTGATGGACAAGATCATTCTCACTGTAGCTGAAGCTATGTCATTAGATCCTCCATCCCCGGTCTTCATTACTGTTGGAGCATTGATATACTACAGTCTTAGGGTTATTCGTGCTAATACTCCTCAGGTGGTAGATCTACCATCTCCACATCATCGATGGTCTGCGTCAAACTCCACAGTAGCTCAAGTGGACAGTGAAATGGGAATTTCTTATGCGCTGAACCTAGGAATTACAAACATTGTTGTTGAGGACACTAGACTTTCTGGTCATGTACAGACCTCATGCATGCATGTTGTCATCCCGGATAAATTGGTCTTATATATAGTACCTTTATCCACTACCTCTACCATGCTTGAAGGAACAAAACCAATTCCCTCGTCTGCCATTTGGTACGTTTTTCCAGGCCAAGAATACATCATTCAGATTAGAGTTTTCTCACAGGCACCTGATGTGAAGGAGATATACATTACAGAGATTAATGATCTGAAATTGGATAGCAGTACTATAAAGTATTGGGACATATTATCTGTGATGGATGAGGTTTCTGTCACATACGATAAGCAAAACTCTAGATTGCTCAAGCCAATATCTCAGGGACAGGGAATTTTGACAGCTTCCCTGAATTATCATCGTGAAATCAATGAAAAACCTGAGATTCTCAGGGCTGTTCAAGAAGTTATCGTTTGCAGTAAAGTTAAGTTCAACTTCGGGGAAGAAGATGAGGCCAGTCAAATCATTCGCCTTCCTTGGGCTCCTGGAATTAGTCAGCAAGTTGAACTAAGGGCCACTGGAGGCTGTGGAAGAAGCCTTGAAGACTATATTTGGCTTTCTTCTAACGAGGCAGTTTTGTCTGTATCTACTTCTGGTTTGTTGCGAGTAAACAGTCCTGGTCGAGCTGTCATTAAAGTGGTTTCAGTTTTTGATTCAATCAATGTTGATGAGGTGGTGGTTGAAGTTTCTGTTCCTTCTTCTATGATTGTACTTCCGAACTTTCCTGTAGAGGTGGTTATCGGAACACAACTTGAAGCTGCGGTGACATTGGAAACATCTGATGGTGACAGATATTTCAGATGTGACGCTTTTAACTCCTTTGTGAGTTGGAAAGTTTTTCCTGAAAATAAAATTTTCAAAGTTCTTGACACAAGCACGGGGAAAAGCTTCCCTACTATGCTGTCACATTTAGATGGGTCAGGCCTCGCTCATGGTCAACCTTGTGCATGGACGCATTTATATGCCTCTGCTGCTGGTCGAGCTGAGCTGCACGCAACTCTGTCTACTGAATTACAGCAATCTGCTCACTTGAAAGACGGAGCCGTCCTTAAAACTGTTTCCTCTCTTGCTGCATATTTGCCTCTTGTTATTCGTCAAGCAGATAGTGGGAATCAGTTTGGTGGTTATTGGATTGATTTAGCCAGGACGCATGCTGATATCCATGATGCTGATCCTACTTGTTTGAATGACATGTATCTTGCCCCTGGATCTTGGATGGATGTGTTATTATTAGGAGGGCCTGAAAGGTGGGATGAAAAGATTGAACATATTGAACTGACAGAAGTTACGATGGAACAAGAGAAATCAGTAACAGGTGGTCTTCTTGTGCAGCAGCCTTCTTCCAGTGATGGGGGGCTTTACAGGGTCTTTTGTCAAACACTGGGGGAATTTAAACTGCTCTTTTCACGGGGAAATTTGGCTGGCGAGGGCCACTGGGTTCCTTCGATAGCATACACACAATTGCTTGTTAAATGCAGCTTCCCTTCATCGATCACTTTGATTGCAAACGAACCTGTAAACTCACCTGGTATTATAGAGGCAGCGGTAAAGGCTGGTCGTACGCCAGACAGAATTCGTACTGCTCCTGTCGTGGTGGCTAATGGATGCACCATACGTGTAGCTGCAGTTGGTATTCATTCAAGTGGAAGGATTTTTGCAAATTCATCTTCTCTTTGCTTGAGATGGGATCTGAACGGGTGTGATGAGCTGGCTCATTGGAACGAGAGCCTGAGTTGTGAGAGTTCTCTGAAAACCGGTTGGGAAAGATTTCTAGTTTTGCATAATGCATCAGGATTGTGTACTATTCGAGCTACAATATCTGGTTTTGCTAAAGTCAAGGACAGCCATTTGTATGAAACGGATTATTTCGACGTGAGCAAAGAAAACATCATTACAGATGCTATGCAATTACAGTTGGTATCTACGCTAAGAATTATTCCGAGCTCTGTGCTATTAGTTTTTGATCCTGAAGCAAAGGTAAATCTTTCTGTTACTGGTGGAACCTGTTTTCTAGATGCTGTGGTAAATGATACACAAGTTGTGCAATTAACCCAACCGCCAGAAGGTGTAGATTGCTCACGTCTGATGCTTAGTGCTAGAGGCTTGGGCACTGCTCTTGTGACAGTTTGGGATATAGGACTTTCTCCTCCTGCTGCTGCTTCTGCCTTGGTCAGAGTTGCAGATGTTGAATGGATTAAGATTATTTCTGATGAAGAGATTAGCCTTATGGAAGGGACTGTTAAAGCTTTTGACATATCAGCAGGGACACAAGACGGTTTTGTTTTCGACTATTCTCAGTACAAATATATGAATATGCAAGTACATATTGATGATGGCATCCTTGAGCTTGTTAGAGTGGATGATTCTTCGAAACTTGGAGGCCGAATAATCTCCATACCTAATTTCTCAGTTAAAGCGACAGTGCTCGGTACTACCACCCTTTATGTCAGTATTAGGCAGCATGGGAATGAAATACTCAGTCAAATGATTAAGGTGGAAGTTTACAGTCCACTTCGCCTAAACCCTGAGTATATTTACCTAGCACCTGGTGCTTCCTACACGCTGACAGTGAAAGGTGGCCCGAAATATGGCGCTCTTGTGGAATATGCTAGCATGGATGGAGAAATTGCAATAATTCAAGGGTCGTCAGGACGAGTTTCTGCGATTTCCACTGGAAATGCAACTGTCCGTGCTACTGTGTTCGGCACTGGAGGTATCTTGATTTGTGAAGCGTACGGCAGAATTCAGGTTGGCATTCCATCAGCAATGATGTTGAGTTCGCAGAGTGACCAGCTCTGTATTGGTTGTAAAATGCCAATTTTTCCATCATTCCAGGAGGGAAACTTATTTTCCTTCTATGAGATATGTAGTAATTATAAATGGGCCGTAGAGGATGAGAAGGTTTTAGCCTTCAGTACACCCAGTCCCTTGCATTCTGTTGCAGACGAAAATTTGTTACCTGGTACTACAGGAAAGACCAATCTTTGCCATTTTGATGACAGCGATAGTGCATTCATCAGTGTATTATCTGGAAGATCTGCAGGCAGGACAAAAGTTTCAGTTTCGTTCTGCTGTGAGTTTGTGTCATCTGGCATTAAACAACTAGTATCTTACAATGCATCTGAGACGTTGACGGTGGTATCTGATCCTCCCTTGGCTCTTGGGATACCCATAACATGGGTTTTGCCACCTTTCTACACTTCATCAGATCGCTTGCCCAGAGTCTCAAATATGCACATCCACTCCAATGACGGAAAGGGTACCGGAACTATTACTTATTCTGTGCTGAAGTCACGGGGAAAGAGAGAGCTCAGAAAGCAGGATGCCATTGTTATTGATGGAAGTAAAATCAGAACAAGGGAAAGCAATGAACTTGCTTGTATCCAGGCAGAGGACCAGATAACTGGTAGAACAGAAATAGCTTCATGTGTAAGAATTGCTGAGGTGGCTCAACTAAGGGCAAGCACGACAGGTTCTACATTCCATGTTGCGTACCTTGCAACAGATGCTAAAATGGAATTGGCAATTAACTACTGCGATGATTTAGGATATTACTTCTCGGAAGCACACGGCGTGGTTCCATTAGACGTTGAGACTAATTATCCTGATGTTGTGTTCGTTCAAGGGGCAAGTGATGCAAATAAGACAAATGGTGGCATTGGAAATATTTTTCTTAAGGCTAGAAATCCAGGGCGAGCTCTTGTGATGGTAACGATGAAATATAAGCCTGAGAAAGCTGACTTCATCCTGGTATCAGTTGGTGCCCAGTTGTATCCTCAAAACCCTGTCATTCATGTTGGACATAGACTTAATTTTACTGTAATTGGAGATGGTATACATGGTCCTCGATCAGGTCAGTGGTCAAGTAGCAATGGAAGTGTTCTGTCTGTAAATAAGATGTCTGGTGAAGCTCACGCACATGGTGAAGGTTTAGTTAAATTGACGTTCAGAGATTCCAATTTAAAGCTGCAGACTACTGTTTCTGTGCTAAAAGCTGATCAGATGTTAGTTGATTCTCCTGCAGAGACATTAACTAACGTCCCATCTCCAGCTGAAGGTTACAAGTTTCCTGTTAAGTTTAGAAATGACCCCTATGGAAAGTTTGAAGCTACTGGAAAGGCTGTTGAAGTCGTATATGATTGCAGGGTTGACCCACCTTATGTCGGGTATGCAAAGCCATGGAGGGATCATGGGACTGGTAATTCATATTGTCTCTTCTTCCCCTACTCACCAAAACATTTGCTGAGTTCCCTGTCCAAGTCAAAGGCTGCAATATCTGAACAATATGACAGAAATGATGGGTTTCTGTACGTTTCGGTCATAGCCTCATTGAGAGAAGCACCTCAAGTTGAGGGAGCTGCCCATGCACTTTTTGTTGGAGGATTCTCTATTGAGGGAGCAGGAAAGTTAAATTTGACACCAAGCTTGAACAAAAGCCTGATAAGAGTTATAGGCAACACAGATGTCGAGATTTATTGGAATGCGAAAGATCTGCTGCTGGTTACCCCTTTCGGAACAGATGGATTTGGCATTGGTGGGGTTAGAGAATACAAGGTTGAAGTGCTGAAAGATCAGAAAATCACAGATACGCTAACAATAGTGCTTCCTACAACAGGTCAGCAAATGGAAGTAGATGTCAACTTCGATCCTGATGGGGAAGGAGGAAGCAGAAAACCCGCAGCAGAGTCGAGTACTTTTATGTGGGGTTTAATTATCACGTGTTTAGTAGGGCTAATAGCCACAGTCCTCAGCTTCATGGGATTGCTCGAGAGAAGAAGTCGAAGAACTTACACGCCACCCACAGTTGCAGCAGGCTCTCCAATAGGCCGACGTGACCAAAGCACTGCCACTCCTACCGCTGCTACTGGTAGCGTTCATTCATCGCCTCATACGCCCAATAGCCCTTTCGTCGATTATGTGAGAAGAACAATAGATGAGACTCCGTATTATAGGCGGACTGGGAGAAGGCGGTTTGATCCGCAGTATACTTACTAG

Protein:   MSIAPYAGRKETAVYAKDGRTGITIRCKVFIDRVSRIQIFHHAVKIDLDELATLRIRAFDDEENVFSSLVGVKFLWKLEPKSLEPNAIHHLVHVPLKETPLSDCGGFCGDLDTQIDLEDRGFGADLYVVRGTKIGHEVVTAQLVEPQLEHVMDKIILTVAEAMSLDPPSPVFITVGALIYYSLRVIRANTPQVVDLPSPHHRWSASNSTVAQVDSEMGISYALNLGITNIVVEDTRLSGHVQTSCMHVVIPDKLVLYIVPLSTTSTMLEGTKPIPSSAIWYVFPGQEYIIQIRVFSQAPDVKEIYITEINDLKLDSSTIKYWDILSVMDEVSVTYDKQNSRLLKPISQGQGILTASLNYHREINEKPEILRAVQEVIVCSKVKFNFGEEDEASQIIRLPWAPGISQQVELRATGGCGRSLEDYIWLSSNEAVLSVSTSGLLRVNSPGRAVIKVVSVFDSINVDEVVVEVSVPSSMIVLPNFPVEVVIGTQLEAAVTLETSDGDRYFRCDAFNSFVSWKVFPENKIFKVLDTSTGKSFPTMLSHLDGSGLAHGQPCAWTHLYASAAGRAELHATLSTELQQSAHLKDGAVLKTVSSLAAYLPLVIRQADSGNQFGGYWIDLARTHADIHDADPTCLNDMYLAPGSWMDVLLLGGPERWDEKIEHIELTEVTMEQEKSVTGGLLVQQPSSSDGGLYRVFCQTLGEFKLLFSRGNLAGEGHWVPSIAYTQLLVKCSFPSSITLIANEPVNSPGIIEAAVKAGRTPDRIRTAPVVVANGCTIRVAAVGIHSSGRIFANSSSLCLRWDLNGCDELAHWNESLSCESSLKTGWERFLVLHNASGLCTIRATISGFAKVKDSHLYETDYFDVSKENIITDAMQLQLVSTLRIIPSSVLLVFDPEAKVNLSVTGGTCFLDAVVNDTQVVQLTQPPEGVDCSRLMLSARGLGTALVTVWDIGLSPPAAASALVRVADVEWIKIISDEEISLMEGTVKAFDISAGTQDGFVFDYSQYKYMNMQVHIDDGILELVRVDDSSKLGGRIISIPNFSVKATVLGTTTLYVSIRQHGNEILSQMIKVEVYSPLRLNPEYIYLAPGASYTLTVKGGPKYGALVEYASMDGEIAIIQGSSGRVSAISTGNATVRATVFGTGGILICEAYGRIQVGIPSAMMLSSQSDQLCIGCKMPIFPSFQEGNLFSFYEICSNYKWAVEDEKVLAFSTPSPLHSVADENLLPGTTGKTNLCHFDDSDSAFISVLSGRSAGRTKVSVSFCCEFVSSGIKQLVSYNASETLTVVSDPPLALGIPITWVLPPFYTSSDRLPRVSNMHIHSNDGKGTGTITYSVLKSRGKRELRKQDAIVIDGSKIRTRESNELACIQAEDQITGRTEIASCVRIAEVAQLRASTTGSTFHVAYLATDAKMELAINYCDDLGYYFSEAHGVVPLDVETNYPDVVFVQGASDANKTNGGIGNIFLKARNPGRALVMVTMKYKPEKADFILVSVGAQLYPQNPVIHVGHRLNFTVIGDGIHGPRSGQWSSSNGSVLSVNKMSGEAHAHGEGLVKLTFRDSNLKLQTTVSVLKADQMLVDSPAETLTNVPSPAEGYKFPVKFRNDPYGKFEATGKAVEVVYDCRVDPPYVGYAKPWRDHGTGNSYCLFFPYSPKHLLSSLSKSKAAISEQYDRNDGFLYVSVIASLREAPQVEGAAHALFVGGFSIEGAGKLNLTPSLNKSLIRVIGNTDVEIYWNAKDLLLVTPFGTDGFGIGGVREYKVEVLKDQKITDTLTIVLPTTGQQMEVDVNFDPDGEGGSRKPAAESSTFMWGLIITCLVGLIATVLSFMGLLERRSRRTYTPPTVAAGSPIGRRDQSTATPTAATGSVHSSPHTPNSPFVDYVRRTIDETPYYRRTGRRRFDPQYTY